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@NBISweden

NBIS - National Bioinformatics Infrastructure Sweden

NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden.

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A distributed national bioinformatics infrastructure supporting life sciences in Sweden

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  1. MrBayes MrBayes Public

    MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

    C 280 87

  2. EMBLmyGFF3 EMBLmyGFF3 Public

    An efficient way to convert gff3 annotation files into EMBL format ready to submit.

    Python 67 15

  3. development-guidelines development-guidelines Public

    Development guidlines for software within NBIS.

    18 9

  4. excelerate-scRNAseq excelerate-scRNAseq Public

    Single RNA-seq data analysis with R (Finland, May, 2019)

    HTML 233 107

  5. GAAS GAAS Public

    Genome Assembly and Annotation Service code

    Perl 219 48

  6. IgDiscover-legacy IgDiscover-legacy Public archive

    Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

    Python 16 10

Repositories

Showing 10 of 375 repositories
  • urdr Public

    Timelogging system of NBIS

    NBISweden/urdr's past year of commit activity
    TypeScript 0 AGPL-3.0 1 52 (1 issue needs help) 6 Updated Nov 1, 2026
  • sda-download-ui Public

    Repository containing the UI implementation of the sda-download service

    NBISweden/sda-download-ui's past year of commit activity
    TypeScript 0 AGPL-3.0 0 6 3 Updated Nov 1, 2026
  • bp-landing-pages Public

    Bigpicture project dataset landing page generator

    NBISweden/bp-landing-pages's past year of commit activity
    HTML 0 0 0 5 Updated Nov 1, 2026
  • SCoRe_user_doc Public

    SCoRe user documentation

    NBISweden/SCoRe_user_doc's past year of commit activity
    Shell 0 GPL-3.0 0 4 0 Updated Nov 1, 2026
  • workshop-ngsintro Public

    Workshop • Intro to Bioinformatics using NGS data • 5 days

    NBISweden/workshop-ngsintro's past year of commit activity
    HTML 19 9 0 0 Updated Oct 31, 2026
  • bird-ringing Public

    A web-based interface and database for managing bird-ringing data on behalf of the Bird Ringing Centre at the Swedish Museum of Natural History, implemented together with NBIS (National Bioinformatics Infrastructure Sweden)

    NBISweden/bird-ringing's past year of commit activity
    Python 1 MIT 0 34 3 Updated Oct 31, 2026
  • workshop-epigenomics Public

    Epigenomics Workshop • Epigenomics Data Analysis • From Bulk to Single Cell

    NBISweden/workshop-epigenomics's past year of commit activity
    Lua 3 CC-BY-SA-4.0 2 0 1 Updated Oct 30, 2026
  • workshop-biomarker Public

    Workshop • Biomarker Discovery : from theory to real world examples - DDLS • 3 days

    NBISweden/workshop-biomarker's past year of commit activity
    Shell 0 GPL-3.0 0 1 0 Updated Oct 29, 2026
  • bp-sweden-web Public

    Website for BigPicture Sweden

    NBISweden/bp-sweden-web's past year of commit activity
    SCSS 0 MIT 1 6 1 Updated Oct 29, 2026
  • workshop-r Public

    Workshop • R Programming Foundations for Data Analysis • 5 days

    NBISweden/workshop-r's past year of commit activity
    CSS 10 GPL-3.0 10 0 0 Updated Oct 29, 2026

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