Issues

• DWI Pipeline Crashes with ValueError: Input in_file was not set but it is listed in iterfields

  connectomicslab/connectomemapper3#243 · Filter by author shaohanyu2021-creator opened on Apr 20, 2026

• Environnment issues on Linux

  connectomicslab/connectomemapper3#240 · Filter by author Hierakonpolis opened on Dec 3, 2024

• Analysis Tutorial susceptible to closed bug fix

  connectomicslab/connectomemapper3#226 · Filter by author ldweinstock opened on Aug 20, 2023

• error when starting cmpbidsappmanager

  connectomicslab/connectomemapper3#225 · Filter by author JuergenHaenggi opened on Aug 3, 2023
  2

• Problem in creating enviornemt.yml

  connectomicslab/connectomemapper3#224 · Filter by author milad7093 opened on Feb 16, 2023
  4

• error reported when I tried to start Connectome Mapper 3 GUI

  connectomicslab/connectomemapper3#223 · Filter by author lhldrs opened on Jan 31, 2023

• how to use only part of cmtklib

  connectomicslab/connectomemapper3#222 · Filter by author hugofluhr opened on Dec 16, 2022

• Adapting Connectomemapper for Windows 10

  Brainhack22!
  connectomicslab/connectomemapper3#220 · Filter by author IsottaR opened on Dec 2, 2022
  4

• CMP on singularity cannot execute parcBrainStem and parcHippo BUG

  connectomicslab/connectomemapper3#216 · Filter by author KyleeCJ opened on Sep 25, 2022
  2

• ENH: "Custom feature": Importing preprocessed data from BIDS Apps

  enhancementhelp wanted
  connectomicslab/connectomemapper3#41 · Filter by author sebastientourbier opened on Jun 25, 2020
  2

• ENH: Implementation of FSL topup for DWI preprocessing

  enhancementhelp wanted
  connectomicslab/connectomemapper3#20 · Filter by author sebastientourbier opened on Jan 6, 2020

• ENH: Implementation of MSMT-CSD for estimation of fiber orientation distribution

  enhancementhelp wanted
  connectomicslab/connectomemapper3#19 · Filter by author sebastientourbier opened on Jan 6, 2020
  

• ENH: Compute and plot network statistics of structural and functional connectivity matrices

  enhancement
  connectomicslab/connectomemapper3#12 · Filter by author sebastientourbier opened on Aug 29, 2019

• ENH: Processing summary report for fMRI pipeline

  Brainhack21!enhancement
  connectomicslab/connectomemapper3#11 · Filter by author sebastientourbier opened on Aug 29, 2019

• ENH: Processing summary report for diffusion pipeline

  Brainhack21!enhancement
  connectomicslab/connectomemapper3#10 · Filter by author sebastientourbier opened on Aug 29, 2019

• ENH: Processing summary report for anatomical pipeline

  Brainhack21!enhancement
  connectomicslab/connectomemapper3#9 · Filter by author sebastientourbier opened on Aug 29, 2019

• Point process analysis of brain fMRI dynamics

  enhancement
  connectomicslab/connectomemapper3#8 · Filter by author sebastientourbier opened on Aug 29, 2019

• Fine-tune T1w <-> meanBo registration as in HCP diffusion preprocessing pipeline

  enhancement
  connectomicslab/connectomemapper3#5 · Filter by author sebastientourbier opened on Jul 24, 2019

• Reconstruct with Constant Solid Angle (Q-Ball)

  enhancement
  connectomicslab/connectomemapper3#3 · Filter by author sebastientourbier opened on Jul 23, 2019

• Addition of new multi-scale fMRI-driven parcellation

  enhancement
  connectomicslab/connectomemapper3#2 · Filter by author sebastientourbier opened on Jul 8, 2019