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@fideus-labs

⨍ideus labs

⨍ideus labs empowers innovators to extract insights from scientific and biomedical images to keep their competitive edge.
README.md

Fideus Labs Logo

Welcome to ⨍ideus labs

Fostering trust 🤝 and advancing understanding 🧠 from scientific and biomedical images 🔬️.

What We Do

  • 🚀 Innovation: Pioneering new technologies and methodologies
  • 💡 Development: Creating robust, scalable software solutions
  • 👥 Collaboration: Building strong partnerships and community connections
  • 🌟 Excellence: Maintaining high standards in everything we deliver

Get Involved

We believe in the power of open source and community collaboration. Check out our repositories to see what we're working on, and feel free to contribute!

Ways to Connect

  • 🌐 Website: fideus.io
  • 📧 Contact: Email info@fideus.io
  • 🤝 Contribute: Browse our open source projects and join the community

Follow us to stay updated on our latest projects and innovations!

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  1. ngff-zarr ngff-zarr Public

    A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.

    Python 74 26

  2. KonfAI KonfAI Public

    A simple and flexible deep learning framework based on PyTorch and YAML configuration files.

    Python 16 3

  3. worker-pool worker-pool Public

    A Web Worker pool with bounded concurrency, plus a companion package that accelerates zarrita codec operations on Web Workers.

    TypeScript 5 2

  4. impact-reg-ooc-demo impact-reg-ooc-demo Public

    Out-of-core multimodal registration with KonfAI and impact-reg: elastix, FireANTs, ConvexAdam and IMPACT feature losses on the APEX / BRAIN CONNECTS hackathon data

    Python

Repositories

Showing 10 of 16 repositories
  • ngff-zarr Public

    A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.

    fideus-labs/ngff-zarr's past year of commit activity
    Python 74 MIT 26 15 19 Updated Oct 21, 2026
  • KonfAI Public

    A simple and flexible deep learning framework based on PyTorch and YAML configuration files.

    fideus-labs/KonfAI's past year of commit activity
    Python 16 Apache-2.0 3 0 5 Updated Oct 20, 2026
  • nd-image-codecs Public

    Composable Zarr v3 codecs for ND scientific images.

    fideus-labs/nd-image-codecs's past year of commit activity
    Rust 6 MIT 1 1 1 Updated Oct 19, 2026
  • fiff Public

    Present TIFF files as a zarrita.js Zarr store following the NGFF OME-Zarr data model

    fideus-labs/fiff's past year of commit activity
    TypeScript 4 MIT 0 1 0 Updated Oct 8, 2026
  • SlicerOMEZarr Public

    3D Slicer extension to open OME-Zarr (OME-NGFF) images, built on ngff-zarr

    fideus-labs/SlicerOMEZarr's past year of commit activity
    Python 3 MIT 1 1 0 Updated Oct 3, 2026
  • worker-pool Public

    A Web Worker pool with bounded concurrency, plus a companion package that accelerates zarrita codec operations on Web Workers.

    fideus-labs/worker-pool's past year of commit activity
    TypeScript 5 MIT 2 0 0 Updated Sep 30, 2026
  • impact-reg-ooc-demo Public

    Out-of-core multimodal registration with KonfAI and impact-reg: elastix, FireANTs, ConvexAdam and IMPACT feature losses on the APEX / BRAIN CONNECTS hackathon data

    fideus-labs/impact-reg-ooc-demo's past year of commit activity
    Python 0 0 0 0 Updated Sep 16, 2026
  • ImpactLoss Public Forked from vboussot/ImpactLoss

    IMPACT Reg: A Generic Semantic Loss for Multimodal Image Registration

    fideus-labs/ImpactLoss's past year of commit activity
    Python 0 Apache-2.0 2 0 1 Updated Sep 8, 2026
  • rumcodecs Public archive

    numcodecs.js reimplemented in Rust

    fideus-labs/rumcodecs's past year of commit activity
    TypeScript 2 MIT 0 0 0 Updated Aug 7, 2026
  • ome-zarr-rfc4-validation Public

    OME-NGFF RFC-4 (axis anatomical orientation) validator + conformance suite. Data: HF fideus-labs/ome-ngff-rfc4-orientation-validation.

    fideus-labs/ome-zarr-rfc4-validation's past year of commit activity
    Python 3 0 0 0 Updated Aug 4, 2026
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